DNA is often thought of as a static archive of genetic information. But genomes are constantly subjected to alterations in their structure and content. Much of this plasticity can be attributed to transposons, pieces of DNA that autonomously ‘jump’ between and within genomes. By driving variation and interspecies transfer of genetic data, transposons shape the biology and the evolution of organisms. But how do transposons move? How do they interact with their hosts? How can we leverage them to artificially modify genomes?
To understand the mechanisms, functions and applications of transposons, the Querques lab analyses the macromolecular organization and the mechanisms underlying DNA mobilization using cryo-electron microscopy and X-ray crystallography together with biochemical and biophysical methods. Irma and her team investigate the interplay between transposons and host machineries, including CRISPR-Cas systems, and their biotechnological potential using cell-based functional assays, protein design and genome engineering experiments.
The project BROADCAST will not only make key contributions to the molecular understanding and harnessing of transposons, but holds the long-term potential to develop genome engineering tools for research and medicine.
About Irma Querques
Irma Querques studied biotechnology at the University of Bologna (Italy) and received her PhD in 2018 from the European Molecular Biology Laboratory in Heidelberg, where she worked on the biochemical and structural characterization of eukaryotic transposons with Prof. Orsolya Barabas. She completed her post-doctoral training in the laboratory of Prof. Martin Jinek at the University of Zurich as a recipient of the FEBS, EMBO and Branco Weiss fellowships to study bacterial CRISPR-associated transposons. In May 2023, Irma established her research group at the Max Perutz Labs.
Identifying and exploiting cell-state dependent metabolic programs
Chromatin as a gatekeeper of chromosome replication
Mind matters. VBC mental health awareness
The multiple facets of Hop1 during meiotic prophase
Chromosomes as Mechanical Objects: from E.coli to Meiosis to Mammalian cells
Convergent evolution of CO2-fixing liquid-liquid phase separation
Viral envelope engineering for cell type specific delivery
New ways of leading: inclusive leadership and revising academic hierarchies
How an opportunistic human pathogen colonizes surfaces - From pathogen behavior to new drugs
Title to be announced
Decoding Molecular Plasticity in the Dark Proteome of the Nuclear Pore Complex
Probing the 3D genome architectural basis of neurodevelopment and aging in vivo
How to tango with four - the evolution of meiotic chromosome segregation after genome duplication
Multidimensional approach to decoding the mysteries of animal development
Membrane remodeling proteins at the junction between prokaryotes and eukaryotes
Connecting mitotic chromosomes to dynamic microtubules - insight from biochemical reconstitution
Neurodiversity in academia: strengths and challenges of neurodivergence
Gene expression dynamics during the awakening of the zygotic genome
When all is lost? Measuring historical signals
Suckers and segments of the octopus arm
Using the house mouse radiation to study the rapid evolution of genes and genetic processes
CRISPR jumps ahead: mechanistic insights into CRISPR-associated transposons
Title to be announced
Enigmatic evolutionary origin and multipotency of the neural crest cells - major drivers of vertebrate evolution
Visualising mitotic chromosomes and nuclear dynamics by correlative light and electron microscopy
Bacterial cell envelope homeostasis at the (post)transcriptional level
Polyploidy and rediploidisation in stressful times
Prdm9 control of meiotic synapsis of homologs in intersubspecific hybrids
RNA virus from museum specimens
Programmed DNA double-strand breaks during meiosis: Mechanism and evolution
Title to be announced